PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC006800.20
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family B3
Protein Properties Length: 143aa    MW: 16382.8 Da    PI: 10.264
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC006800.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B369.35e-2213109295
                   EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
            B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                   +kvl++sdv+++gr+vlpkk ae+h  +++ + ++ + +ed  ++++W++++++  ++ks++y+l+ ++ +Fv+angL+egDf+v++  ++ +++++
  EcC006800.20  13 QKVLKQSDVGNLGRIVLPKKEAETHlpELEARDGISIAMEDiGTSKVWNMRYRFwpNNKSRMYLLE-NTGDFVRANGLEEGDFIVIY--SDvKCGKY 106
                   79*************************999999********7778*******99777777777777.********************..55599988 PP

                   EEE CS
            B3  93 vvk 95 
                   +++
  EcC006800.20 107 LIR 109
                   876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.106.6E-307121IPR015300DNA-binding pseudobarrel domain
CDDcd100152.82E-4010111No hitNo description
SuperFamilySSF1019361.11E-2411106IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.81412114IPR003340B3 DNA binding domain
SMARTSM010196.1E-2012114IPR003340B3 DNA binding domain
PfamPF023623.2E-1813109IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006414Biological Processtranslational elongation
GO:0006468Biological Processprotein phosphorylation
GO:0010082Biological Processregulation of root meristem growth
GO:0005840Cellular Componentribosome
GO:0003677Molecular FunctionDNA binding
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0004672Molecular Functionprotein kinase activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
GWKPENNLKF LLQKVLKQSD VGNLGRIVLP KKEAETHLPE LEARDGISIA MEDIGTSKVW  60
NMRYRFWPNN KSRMYLLENT GDFVRANGLE EGDFIVIYSD VKCGKYLIRG VKVRQPEGTK  120
PEAHKRPEKS QRSAHASSSQ KKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010026024.12e-98PREDICTED: B3 domain-containing transcription factor ABI3
SwissprotQ015931e-80ABI3_ARATH; B3 domain-containing transcription factor ABI3
TrEMBLA0A067K3N41e-80A0A067K3N4_JATCU; Uncharacterized protein
TrEMBLR4TV461e-80R4TV46_POPTO; ABI3
STRINGPOPTR_0002s25330.15e-80(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.16e-82B3 family protein